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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126063862_126077166_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126063862 - 126077166

Intron Length:

13305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTTT

5'SS Class:

strong_major

3'SS Sequence:

TCTCCCTGTTCAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

ATTAAGTGAATG

Flanking Amino Acid:

LNKIFQQNTQAVRSGWLPPP

Intron Amino Acid Position:

321

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.5

0.79

0.9

81.9

32.1

Major BPS

84.4

0.85

1.1

34.5

Major PPT

78.5

0.64

0.9

76.5

32.1

Minor 5ss

-0.9

3.5

64.1

47.4

Minor BPS

42.9

-0.6

2.3

52.66

41.9

Associated Gene:

Gene:

REPS2

Ensembl Gene ID:

ENSAPLG00000011221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039939

126046000 - 126106510

60511

ENSAPLT00000031472

126046000 - 126104674

58675

ENSAPLT00000029376

126046000 - 126104674

58675

ENSAPLT00000011757

126046000 - 126106558

60559

ENSAPLT00000043948

126046000 - 126106558

60559