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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126091533_126098912_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126091533 - 126098912

Intron Length:

7380

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTT

5'SS Class:

strong_major

3'SS Sequence:

CTTTCTCCTCTAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTCCT

U12 Branch Point Sequence:

TTTTCCTTCTTT

Flanking Amino Acid:

LQPDLNSFISASLKPLRDCA

Intron Amino Acid Position:

115

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

99.2

1.16

0.6

9.5

Major BPS

39.5

-0.6

4.3

85.7

34.9

Major PPT

81.5

0.71

0.7

74.1

Minor 5ss

46.1

-0.4

2.8

66.9

44.4

Minor BPS

48.4

-0

3.6

87.57

38.6

Associated Gene:

Gene:

REPS2

Ensembl Gene ID:

ENSAPLG00000011221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029376

126046000 - 126104674

58675