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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126102954_126104525_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

126102954 - 126104525

Intron Length:

1572

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGGGT

5'SS Class:

major

3'SS Sequence:

GTTTTTGCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CGTTGAT

U12 Branch Point Sequence:

GTTTTTGCAACA

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.2

67.8

43.5

Major BPS

68.9

0.47

1.2

60.7

45.9

Major PPT

74.4

0.55

40.3

Minor 5ss

36.5

-1.5

3.7

55.9

48.3

Minor BPS

48.8

-0

2.1

67.57

39.2

Associated Gene:

Gene:

REPS2

Ensembl Gene ID:

ENSAPLG00000011221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000029376

126046000 - 126104674

58675

ENSAPLT00000044177

126046000 - 126105416

59417

ENSAPLT00000025271

126046000 - 126108299

62300

ENSAPLT00000042020

126046000 - 126105416

59417

ENSAPLT00000017467

126046000 - 126106510

60511

ENSAPLT00000039939

126046000 - 126106510

60511

ENSAPLT00000011757

126046000 - 126106558

60559

ENSAPLT00000031472

126046000 - 126104674

58675