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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126104675_126106434_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

5UTR

Intron Coordinates:

126104675 - 126106434

Intron Length:

1760

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAGT

5'SS Class:

strong_major

3'SS Sequence:

TCTTTCAATGAAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTGAA

U12 Branch Point Sequence:

TCTCTTTCAATG

Flanking Amino Acid:

5UTR

Intron Amino Acid Position:

5UTR

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.6

0.77

74.5

41.9

Major BPS

82.1

0.8

71.6

36.4

Major PPT

0.41

1.1

69.3

34.9

Minor 5ss

41.2

-1

2.9

54.6

44.5

Minor BPS

50.7

-0.1

1.6

56.05

40.2

Associated Gene:

Gene:

REPS2

Ensembl Gene ID:

ENSAPLG00000011221

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017467

126046000 - 126106510

60511

ENSAPLT00000011757

126046000 - 126106558

60559

ENSAPLT00000039939

126046000 - 126106510

60511

ENSAPLT00000025271

126046000 - 126108299

62300