Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_126173738_126174378_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126173738 - 126174378

Intron Length:

641

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTGAGTGTC

5'SS Class:

strong_major

3'SS Sequence:

ATGCATGTTCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATGCAT

U12 Branch Point Sequence:

AACTGCTGATGT

Flanking Amino Acid:

EDNIMQIWQMSLAAL*

Intron Amino Acid Position:

403

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.8

0.82

0.8

77.5

30.7

Major BPS

67.2

0.43

1.4

77.7

37.1

Major PPT

68.6

0.42

58.2

46.5

Minor 5ss

31.9

-2.1

3.3

40.3

40.2

Minor BPS

-0.6

2.2

56.11

45.9

Associated Gene:

Gene:

RBBP7

Ensembl Gene ID:

ENSAPLG00000011785

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000026320

126166168 - 126174449

8282