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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126212449_126213884_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126212449 - 126213884

Intron Length:

1436

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAACTT

5'SS Class:

strong_major

3'SS Sequence:

TTCTCTCTCACAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AAATAAT

U12 Branch Point Sequence:

TTTCTCACAAAT

Flanking Amino Acid:

KKKEETSVVEEETADWEKEL

Intron Amino Acid Position:

291

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.8

0.77

0.9

77.9

36.7

Major BPS

71.2

0.53

70.3

31.9

Major PPT

84.5

0.78

0.7

79.6

25.9

Minor 5ss

37.2

-1.4

3.4

56.5

47.6

Minor BPS

49.6

0.05

1.9

76.23

39.6

Associated Gene:

Gene:

SYAP1

Ensembl Gene ID:

ENSAPLG00000012524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013068

126212321 - 126228664

16344