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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126214058_126220246_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

126214058 - 126220246

Intron Length:

6189

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCAGAGAAG

5'SS Class:

major

3'SS Sequence:

CTTTTGGGGTAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTATAT

U12 Branch Point Sequence:

TATCCTCCCACT

Flanking Amino Acid:

QAVEKKRGEQSFYNTILLQD

Intron Amino Acid Position:

233

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

61.9

42.9

Major BPS

79.2

0.73

75.3

39.4

Major PPT

53.6

0.08

1.3

59.5

45.3

Minor 5ss

19.2

-3.5

3.9

29.2

43.7

Minor BPS

44.3

-0.3

2.2

67.86

42.5

Associated Gene:

Gene:

SYAP1

Ensembl Gene ID:

ENSAPLG00000012524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013068

126212321 - 126228664

16344