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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126215008_126220272_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

126215008 - 126220272

Intron Length:

5265

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTAGAAAAA

5'SS Class:

weak_major

3'SS Sequence:

TGTTACAATAAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTACAAT

U12 Branch Point Sequence:

GTTACAATAAAG

Flanking Amino Acid:

LTALAAQQQAPQIKSQEDEE

Intron Amino Acid Position:

238

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.1

0.1

1.1

55.2

37.8

Major BPS

65.2

0.38

1.3

73.4

38.5

Major PPT

58.9

0.2

1.2

57.8

41.3

Minor 5ss

32.9

-1.9

3.3

44.4

44.5

Minor BPS

46.3

-0.4

57.29

42.9

Associated Gene:

Gene:

SYAP1

Ensembl Gene ID:

ENSAPLG00000012524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042854

126212321 - 126228664

16344