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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126220370_126221022_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126220370 - 126221022

Intron Length:

653

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACA|GTAAGTAAC

5'SS Class:

major

3'SS Sequence:

TCTCTCTCTCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAGTAAT

U12 Branch Point Sequence:

TAATCAGTATCT

Flanking Amino Acid:

NRMRFDLVPKHVKEEVFWRN

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.9

0.66

75.5

34.3

Major BPS

76.6

0.66

1.1

75.9

36.3

Major PPT

80.9

0.69

0.7

73.7

31.4

Minor 5ss

38.2

-1.3

2.8

51.4

39.2

Minor BPS

46.5

-0.1

2.4

71.52

44.7

Associated Gene:

Gene:

SYAP1

Ensembl Gene ID:

ENSAPLG00000012524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042854

126212321 - 126228664

16344

ENSAPLT00000013068

126212321 - 126228664

16344