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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126221575_126223133_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126221575 - 126223133

Intron Length:

1559

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACGTAC

5'SS Class:

major

3'SS Sequence:

CTTTCAATAACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCAAT

U12 Branch Point Sequence:

TTTTCTTTCAAT

Flanking Amino Acid:

FVQEQQTKKSEAAVPPWVDS

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.2

37.3

Major BPS

76.9

0.67

1.2

31.9

Major PPT

72.5

0.51

67.2

36.9

Minor 5ss

42.6

-0.8

3.2

58.3

46.6

Minor BPS

68.2

0.65

1.8

88.96

35.8

Associated Gene:

Gene:

SYAP1

Ensembl Gene ID:

ENSAPLG00000012524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042854

126212321 - 126228664

16344

ENSAPLT00000013068

126212321 - 126228664

16344