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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126225615_126228450_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

126225615 - 126228450

Intron Length:

2836

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GCA|GTGAGTGTC

5'SS Class:

major

3'SS Sequence:

TCATCTGTGAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTCTTTTCATCT

Flanking Amino Acid:

ALLSQAKGLGSYLFNFATAA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.2

0.55

69.8

34.9

Major BPS

100

1.24

0.5

100

Major PPT

56.8

0.15

1.2

58.9

40.9

Minor 5ss

-1.8

3.4

49.1

41.3

Minor BPS

54.2

0.21

1.8

75.13

42.3

Associated Gene:

Gene:

SYAP1

Ensembl Gene ID:

ENSAPLG00000012524

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042854

126212321 - 126228664

16344