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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12627527_12662688_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12627527 - 12662688

Intron Length:

35162

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAT|GTACGTATC

5'SS Class:

major

3'SS Sequence:

TTTATGTTCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTATGTTCACA

Flanking Amino Acid:

PPAGTGCVNFMATATHRGQV

Intron Amino Acid Position:

166

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

78.4

Major BPS

96.5

1.15

0.6

34.2

Major PPT

81.5

0.71

0.9

75.9

37.9

Minor 5ss

41.7

-0.9

3.1

58.6

39.2

Minor BPS

48.6

-0.1

2.4

71.25

41.2

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130