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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126498629_126498814_R


Intron Information:

Intron Rank:
2

Intron Class:
major

Intron Phase:
2

Intron Coordinates:
126498629 - 126498814

Intron Length:
186

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
CAG|GTGCTGAAA

5'SS Class:
major

3'SS Sequence:
AATGGCCTCCCAG|A

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTGAAT

U12 Branch Point Sequence:
TGGGCTTTGAAT

Flanking Amino Acid:
SLTLNPAEECRAGEQLTARQ

Intron Amino Acid Position:
36

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
67.3
0.41
1.1
64
37.4

Major BPS
74.6
0.61
1.4
84
34.5

Major PPT
63
0.29
1
51.3
43

Minor 5ss
25.1
-2.9
3.1
30.6
42.8

Minor BPS
54.2
0.21
1.6
68.4
42.8

Associated Gene:

Gene:
GRPR

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

126474001 - 126512248
38248