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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12662825_12697348_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12662825 - 12697348

Intron Length:

34524

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTCTG

5'SS Class:

strong_major

3'SS Sequence:

GCCTTTCTTGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TACTTTTTATCT

Flanking Amino Acid:

SVGGSSAFGFGIMSDHQFGN

Intron Amino Acid Position:

121

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.9

0.87

0.9

74.5

41.9

Major BPS

96.5

1.15

0.6

34.2

Major PPT

77.9

0.63

0.8

72.9

Minor 5ss

-1.4

47.2

42.5

Minor BPS

62.6

0.47

1.6

76.08

41.1

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011979

12456661 - 12742790

286130

ENSAPLT00000047207

12456661 - 12742790

286130