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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126668599_126669272_R


Intron Information:

Intron Rank:
5

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
126668599 - 126669272

Intron Length:
674

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GTG|GTGAGTTAC

5'SS Class:
strong_major

3'SS Sequence:
TCATCTGTTGCAG|G

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTAAAA

U12 Branch Point Sequence:
AAACCCTCATCT

Flanking Amino Acid:
PVTRWKTAICGLFERQKCPR

Intron Amino Acid Position:
123

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.4
0.81
0.9
76.2
28.3

Major BPS
73.1
0.58
1
79.6
29.1

Major PPT
78.3
0.64
0.9
72.6
37.3

Minor 5ss
35.2
-1.7
2.8
40.3
40.2

Minor BPS
49.6
0.05
1.8
67.11
42.6

Associated Gene:

Gene:
ZRSR2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

126668117 - 126675969
7853