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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126706365_126710473_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126706365 - 126710473

Intron Length:

4109

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGCAGC

5'SS Class:

major

3'SS Sequence:

TCCTTGTTTTTAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATAGAAT

U12 Branch Point Sequence:

GTCAATAGAATA

Flanking Amino Acid:

LVVAGIQQRKKKNKESTERE

Intron Amino Acid Position:

175

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.8

0.68

69.9

41.1

Major BPS

54.1

0.1

1.4

64.1

39.8

Major PPT

81.5

0.71

0.8

80.2

31.9

Minor 5ss

41.4

-1

2.9

52.4

38.7

Minor BPS

40.9

-0.6

1.7

47.75

35.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020227

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040171

126690613 - 126711457

20845