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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1267233_1270429_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

1267233 - 1270429

Intron Length:

3197

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAG|GCTGCCGGA

5'SS Class:

weak_major

3'SS Sequence:

GTAAAAAGCAGAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TCCTCAA

U12 Branch Point Sequence:

GTCTCCTCAAGA

Flanking Amino Acid:

LTGVQDANGKGATKGKARSC

Intron Amino Acid Position:

425

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.3

0.22

1.4

43.7

Major BPS

73.1

0.58

73.8

32.3

Major PPT

-0.5

1.7

32.2

39.7

Minor 5ss

25.9

-2.8

4.2

38.8

46.4

Minor BPS

57.8

0.24

1.9

68.35

43.9

Associated Gene:

Gene:

NRF1

Ensembl Gene ID:

ENSAPLG00000003164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047126

1267098 - 1289780

22683