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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_126726270_126727330_F

Intron Information:

Intron Rank:
4
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
126726270 - 126727330
Intron Length:
1061

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
ATG|GTAAGTTGC
5'SS Class:
strong_major
3'SS Sequence:
CCCTGCTTTACAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
TTGTCAT
U12 Branch Point Sequence:
CCCTGCTTTACA
Flanking Amino Acid:
DLKNEAAKLNGYADYGDYWR
Intron Amino Acid Position:
194

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
87.2
0.88
0.9
74.9
36.2
Major BPS
84.8
0.86
1.1
85.7
34.9
Major PPT
78.1
0.63
0.8
71
33.4
Minor 5ss
40.7
-1
2.8
49.7
41.9
Minor BPS
48.8
-0.1
2.1
58.55
47.1

Associated Gene:

Gene:
ACE2
Ensembl Gene ID:
ENSAPLG00000014477
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015165
126720102 - 126736364
16263