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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_126730547_126731573_F

Intron Information:

Intron Rank:
8
Intron Class:
major
Intron Phase:
2
Intron Coordinates:
126730547 - 126731573
Intron Length:
1027

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAG|GTACTGCAG
5'SS Class:
major
3'SS Sequence:
CCCTGGCTTGCAG|G
3'SS Class:
major_PPT
U2 Branch Point Sequence:
CTCTAAC
U12 Branch Point Sequence:
ATATCTCTAACC
Flanking Amino Acid:
TAWDMGKNDYRIKMCTKVTM
Intron Amino Acid Position:
357

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
67.3
0.41
1.1
53.5
45
Major BPS
72.3
0.55
1
73.3
28.9
Major PPT
72
0.5
0.9
64.2
36.7
Minor 5ss
29.1
-2.4
3.4
38.3
46.7
Minor BPS
65.6
0.47
1.6
74.63
35.4

Associated Gene:

Gene:
ACE2
Ensembl Gene ID:
ENSAPLG00000014477
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015165
126720102 - 126736364
16263