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PNB, Uconn

Construction by: Audrey Weber

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Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_126735835_126736241_F

Intron Information:

Intron Rank:
13
Intron Class:
major
Intron Phase:
1
Intron Coordinates:
126735835 - 126736241
Intron Length:
407

Sequence Information:

Terminal Dinucleotides:
GT-AG
5'SS Sequence:
CAT|GTATGTATT
5'SS Class:
major
3'SS Sequence:
CTTTTTCCATCAG|A
3'SS Class:
strong_PPT
U2 Branch Point Sequence:
CTCTGAC
U12 Branch Point Sequence:
TCTTTTTCCATC
Flanking Amino Acid:
YIGWNTDWTPYSENAIKVRI
Intron Amino Acid Position:
613

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev
Major 5ss
79.9
0.7
1
85.6
30.5
Major BPS
69.1
0.47
1
60.7
37.6
Major PPT
82.5
0.73
0.8
82.5
27.8
Minor 5ss
50.8
0.03
2.5
73.1
36.3
Minor BPS
47.6
-0.2
1.9
61.08
39.5

Associated Gene:

Gene:
ACE2
Ensembl Gene ID:
ENSAPLG00000014477
Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length
ENSAPLT00000015165
126720102 - 126736364
16263