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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126756272_126756681_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126756272 - 126756681

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAATCCCG

5'SS Class:

major

3'SS Sequence:

GTTTTCTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CATTTAT

U12 Branch Point Sequence:

TCAACTTTAAGA

Flanking Amino Acid:

LIHYHQHNSAGIVTRLRHAV

Intron Amino Acid Position:

359

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.8

0.61

1.1

59.1

45.5

Major BPS

76.3

0.65

67.3

39.3

Major PPT

85.6

0.8

0.7

81.4

30.6

Minor 5ss

38.3

-1.3

48.9

46.7

Minor BPS

57.9

0.25

1.7

64.5

42.1

Associated Gene:

Gene:

BMX

Ensembl Gene ID:

ENSAPLG00000015413

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000016140

126748733 - 126775057

26325