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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126854792_126857040_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126854792 - 126857040

Intron Length:

2249

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAATGAG

5'SS Class:

major

3'SS Sequence:

TTCACCTACCTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ATTTCAC

U12 Branch Point Sequence:

TTTATTTCACCT

Flanking Amino Acid:

NTSTTYVSKTLFEISVPLTS

Intron Amino Acid Position:

150

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.1

0.62

39.9

Major BPS

81.3

0.78

0.8

83.4

26.1

Major PPT

65.9

0.36

0.9

58.6

37.3

Minor 5ss

31.9

-2.1

3.3

40.3

45.9

Minor BPS

0.14

1.8

76.2

40.8

Associated Gene:

Gene:

VEGFD

Ensembl Gene ID:

ENSAPLG00000013929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000027645

126833280 - 126862294

29015

ENSAPLT00000025123

126826118 - 126862294

36177

ENSAPLT00000014531

126808231 - 126862294

54064

ENSAPLT00000039788

126815968 - 126858158

42191