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Intron Name: Anas_platyrhynchos_platyrhynchos_1_126858070_126860521_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

126858070 - 126860521

Intron Length:

2452

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGATA

5'SS Class:

strong_major

3'SS Sequence:

TGAACTATTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTGAA

U12 Branch Point Sequence:

GTTTTTTGAACT

Flanking Amino Acid:

VDVQHPNRREGLPPLAELAM

Intron Amino Acid Position:

232

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.3

0.78

0.9

81.1

32.6

Major BPS

87.2

0.92

0.8

77.7

37.1

Major PPT

70.2

0.46

62.8

42.6

Minor 5ss

35.2

-1.7

3.3

48.1

47.6

Minor BPS

71.2

0.75

1.3

85.21

34.8

Associated Gene:

Gene:

VEGFD

Ensembl Gene ID:

ENSAPLG00000013929

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025123

126826118 - 126862294

36177

ENSAPLT00000014531

126808231 - 126862294

54064

ENSAPLT00000027645

126833280 - 126862294

29015