Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_126929689_126931955_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

126929689 - 126931955

Intron Length:

2267

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCCCTTT

5'SS Class:

weak_major

3'SS Sequence:

GCTCTCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGATTAA

U12 Branch Point Sequence:

ACGTGTGTAACC

Flanking Amino Acid:

PLGRLFLQKEGPLSLMHLCR

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

64.8

0.35

1.2

65.9

42.4

Major BPS

60.4

0.26

1.2

52.1

43.5

Major PPT

79.4

0.66

0.8

73.1

31.8

Minor 5ss

48.8

-0.1

3.1

73.3

43.6

Minor BPS

45.2

-0.3

2.3

55.55

43.5

Associated Gene:

Gene:

ASB9

Ensembl Gene ID:

ENSAPLG00000013447

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014025

126913897 - 126932120

18224