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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127021370_127021779_F

Intron Information:

Intron Rank:

132735

Intron Class:

major

Intron Phase:

Intron Coordinates:

127021370 - 127021779

Intron Length:

410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAC|GTAAGTCGA

5'SS Class:

major

3'SS Sequence:

TTTTGTGTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAG

U12 Branch Point Sequence:

GCAGCTGTATTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.3

68.9

43.8

Major BPS

64.6

0.36

1.5

63.4

44.3

Major PPT

86.8

0.83

0.9

84.6

Minor 5ss

-1.7

2.9

40.5

38.8

Minor BPS

40.8

-0.6

2.1

52.38

43.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000021348

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045215

127019820 - 127021988

2169