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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127129125_127130392_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127129125 - 127130392

Intron Length:

1268

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCA|GTAAGTATT

5'SS Class:

strong_major

3'SS Sequence:

CTTTTCTTTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

AAATACCTAACA

Flanking Amino Acid:

CFTDYYPNFLTKIVIFEMPW

Intron Amino Acid Position:

178

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.5

0.72

32.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

93.5

0.98

0.6

92.1

18.4

Minor 5ss

43.9

-0.7

2.9

66.1

38.6

Minor BPS

54.5

0.14

1.9

66.52

38.6

Associated Gene:

Gene:

MOSPD2

Ensembl Gene ID:

ENSAPLG00000013235

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013798

127112793 - 127145480

32688