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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127145290_127145471_R


Intron Information:

Intron Rank:
1

Intron Class:
major

Intron Phase:
0

Intron Coordinates:
127145290 - 127145471

Intron Length:
182

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
GAC|GTGAGTGGG

5'SS Class:
major

3'SS Sequence:
TCGCCCTCAGCAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTTTTGT

U12 Branch Point Sequence:
TCGCCCTCAGCA

Flanking Amino Acid:
MADRRDKAALVSE

Intron Amino Acid Position:
4

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
72.2
0.52
1.3
63.1
43.4

Major BPS
38.1
-0.7
4.3
71.7
44.6

Major PPT
67.5
0.39
0.9
62.7
33.1

Minor 5ss
28
-2.5
3
30.4
36.1

Minor BPS
49.7
-0
1.8
61.22
44.6

Associated Gene:

Gene:
MOSPD2

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

127112793 - 127145480
32688