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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127194100_127219052_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127194100 - 127219052

Intron Length:

24953

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAAACCG

5'SS Class:

major

3'SS Sequence:

ATTTATCTCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTTAT

U12 Branch Point Sequence:

TCTTCTTTGACT

Flanking Amino Acid:

VNQIGNSSLREDEVARDSRF

Intron Amino Acid Position:

401

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.9

0.45

1.1

53.3

43.9

Major BPS

88.7

0.96

0.8

36.5

Major PPT

80.7

0.69

0.8

77.9

35.5

Minor 5ss

31.2

-2.2

3.1

32.1

41.9

Minor BPS

82.3

1.1

90.81

33.2

Associated Gene:

Gene:

GLRA2

Ensembl Gene ID:

ENSAPLG00000013072

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020086

127193747 - 127321247

127501

ENSAPLT00000013615

127193747 - 127321247

127501