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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12742111_12742771_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

12742111 - 12742771

Intron Length:

661

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GGG|GCGAAAGGA

5'SS Class:

weak_major

3'SS Sequence:

CAGCAGCATGGAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CCTGGAT

U12 Branch Point Sequence:

GATGCCCGAGCG

Flanking Amino Acid:

TGTEGWAAAGGPRGLA

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.3

53.4

40.3

Major BPS

48.6

-0

1.4

48.7

45.1

Major PPT

43.7

-0.3

1.7

39.4

38.7

Minor 5ss

12.9

-4.3

3.4

11.5

28.2

Minor BPS

41.8

-0.7

47.54

44.7

Associated Gene:

Gene:

RELN

Ensembl Gene ID:

ENSAPLG00000011317

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047207

12456661 - 12742790

286130

ENSAPLT00000011979

12456661 - 12742790

286130