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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1276462_1278071_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1276462 - 1278071

Intron Length:

1610

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTCCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AATAAAA

U12 Branch Point Sequence:

ACGTCTTCAGCT

Flanking Amino Acid:

NPDGTVSLIQVGTGATVATL

Intron Amino Acid Position:

295

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.8

0.87

0.8

79.3

31.1

Major BPS

56.5

0.16

0.9

63.3

29.1

Major PPT

76.6

0.6

0.9

70.1

36.4

Minor 5ss

33.2

-1.9

2.8

46.4

Minor BPS

49.9

0.07

1.8

66.27

44.7

Associated Gene:

Gene:

NRF1

Ensembl Gene ID:

ENSAPLG00000003164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047126

1267098 - 1289780

22683

ENSAPLT00000042267

1268512 - 1289780

21269

ENSAPLT00000003275

1266696 - 1289780

23085