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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127686127_127696459_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127686127 - 127696459

Intron Length:

10333

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAATAAA

5'SS Class:

strong_major

3'SS Sequence:

CTCTTCTGCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTCAT

U12 Branch Point Sequence:

TTGCTCATAACA

Flanking Amino Acid:

RGNVSPLGIQGCFECCIKCL

Intron Amino Acid Position:

282

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.4

0.91

0.8

85.6

24.6

Major BPS

79.7

0.74

79.6

35.6

Major PPT

72.7

0.51

0.8

72.6

32.2

Minor 5ss

34.4

-1.8

2.8

41.8

44.8

Minor BPS

62.5

0.39

1.6

73.56

37.9

Associated Gene:

Gene:

GPM6B

Ensembl Gene ID:

ENSAPLG00000013046

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000030705

127678340 - 127705976

27637

ENSAPLT00000021012

127603730 - 127706364

102635

ENSAPLT00000020637

127678340 - 127706367

28028

ENSAPLT00000037038

127678340 - 127708073

29734