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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127727499_127728178_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

127727499 - 127728178

Intron Length:

680

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACCATC

5'SS Class:

major

3'SS Sequence:

ATTCTCCCTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTAATTTAATT

Flanking Amino Acid:

KVTEDEKKNKEKAMLLHEEA

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.1

0.66

1.2

76.2

39.9

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

81.9

0.72

0.8

78.5

29.5

Minor 5ss

49.5

-0

2.6

69.3

41.4

Minor BPS

0.71

1.5

85.64

34.4

Associated Gene:

Gene:

OFD1

Ensembl Gene ID:

ENSAPLG00000012863

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000013425

127711028 - 127741324

30297