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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127741774_127743468_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

127741774 - 127743468

Intron Length:

1695

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTGCGTGTT

5'SS Class:

strong_major

3'SS Sequence:

GGAAATGTATTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACTAAT

U12 Branch Point Sequence:

TCTTCTGGAAAT

Flanking Amino Acid:

FLPPGKAESKDDHRHLNQFI

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.4

0.81

0.9

81.5

32.3

Major BPS

86.7

0.91

0.7

84.2

21.8

Major PPT

49.3

-0

1.1

44.4

46.1

Minor 5ss

32.1

-2

3.5

48.8

47.4

Minor BPS

48.9

-0

2.2

73.72

43.2

Associated Gene:

Gene:

TRAPPC2B

Ensembl Gene ID:

ENSAPLG00000030870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000022951

127741664 - 127745434

3771