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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127743614_127744544_F

Intron Information:

Intron Rank:

Intron Class:

minor

Intron Phase:

Intron Coordinates:

127743614 - 127744544

Intron Length:

931

Sequence Information:

Terminal Dinucleotides:

AT-AC

5'SS Sequence:

GAC|ATATCCTTT

5'SS Class:

strong_minor

3'SS Sequence:

TTAATTGTTTTAC|A

3'SS Class:

strong_BPS

U2 Branch Point Sequence:

TTGTAAA

U12 Branch Point Sequence:

CTGTCCTTAATT

Flanking Amino Acid:

WFVSAFVTAGHMRFIMLHDV

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

-1.1

3.4

53.2

46.3

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

42.3

-0.4

3.2

66.1

44.9

Minor 5ss

1.6

0.7

18.9

Minor BPS

82.2

1.09

1.1

87.53

38.7

Associated Gene:

Gene:

TRAPPC2B

Ensembl Gene ID:

ENSAPLG00000030870

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040863

127741425 - 127745434

4010

ENSAPLT00000022951

127741664 - 127745434

3771