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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1278270_1280732_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1278270 - 1280732

Intron Length:

2463

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTGTCTCTG

5'SS Class:

major

3'SS Sequence:

ATTCTCCTGGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTTAC

U12 Branch Point Sequence:

ACCCTCTCAACT

Flanking Amino Acid:

RVEIGQHNSEVSWTQALRTI

Intron Amino Acid Position:

229

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.8

0.44

1.2

61.4

44.7

Major BPS

86.6

0.91

0.8

77.7

36.7

Major PPT

74.1

0.54

70.2

35.7

Minor 5ss

-0.6

2.8

58.1

46.5

Minor BPS

55.6

0.25

1.6

67.57

43.2

Associated Gene:

Gene:

NRF1

Ensembl Gene ID:

ENSAPLG00000003164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047126

1267098 - 1289780

22683

ENSAPLT00000042267

1268512 - 1289780

21269

ENSAPLT00000003275

1266696 - 1289780

23085