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Intron Name: Anas_platyrhynchos_platyrhynchos_1_127926039_127929230_F

Intron Information:

Intron Rank:

138958

Intron Class:

major

Intron Phase:

Intron Coordinates:

127926039 - 127929230

Intron Length:

3192

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTAAGTTGC

5'SS Class:

strong_major

3'SS Sequence:

GTTGTTTATCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TGTTGTTTATCT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.2

0.88

0.9

74.9

36.2

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

73.8

0.54

66.6

44.3

Minor 5ss

40.7

-1

2.8

49.7

41.9

Minor BPS

58.6

0.35

80.3

41.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000024797

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043480

127924297 - 127929404

5108