Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_128034601_128035032_R

Intron Information:

Intron Rank:

140978

Intron Class:

major

Intron Phase:

Intron Coordinates:

128034601 - 128035032

Intron Length:

432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGA|GTAAGTCTG

5'SS Class:

major

3'SS Sequence:

CCTGTCACCCTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

GATTTAT

U12 Branch Point Sequence:

ATGCCCTTAAAG

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.9

0.59

1.1

66.4

45.1

Major BPS

70.9

0.52

1.2

63.7

43.9

Major PPT

0.32

0.8

55.2

35.1

Minor 5ss

39.1

-1.2

46.9

42.4

Minor BPS

64.9

0.33

1.5

65.01

42.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000023174

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019578

128033956 - 128035499

1544