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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1280811_1283837_R

Intron Information:

Intron Rank:

Intron Class:

major_hybrid

Intron Phase:

Intron Coordinates:

1280811 - 1283837

Intron Length:

3027

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCAGG

5'SS Class:

strong_major

3'SS Sequence:

ACAAAAAAACGAG|C

3'SS Class:

major_hybrid

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTCTCTTTATCT

Flanking Amino Acid:

IPVSVDKMTQLFLTKYYKAR

Intron Amino Acid Position:

203

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.9

72.7

44.5

Major BPS

83.9

0.84

73.9

41.3

Major PPT

38.4

-0.6

1.6

23.7

34.3

Minor 5ss

38.8

-1.3

2.8

48.8

Minor BPS

73.4

0.81

1.5

87.39

38.7

Associated Gene:

Gene:

NRF1

Ensembl Gene ID:

ENSAPLG00000003164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000042267

1268512 - 1289780

21269

ENSAPLT00000003275

1266696 - 1289780

23085

ENSAPLT00000047126

1267098 - 1289780

22683