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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12816237_12818384_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12816237 - 12818384

Intron Length:

2148

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAACTTAC

5'SS Class:

strong_major

3'SS Sequence:

GTTTATTTTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTTAT

U12 Branch Point Sequence:

TTGCTCTCAATT

Flanking Amino Acid:

HDEGEAGQLKGLSAHAHVEL

Intron Amino Acid Position:

305

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

1.1

78.4

32.4

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

82.3

0.73

0.8

77.5

36.5

Minor 5ss

-0.4

2.6

61.1

43.8

Minor BPS

62.4

0.47

1.5

77.26

39.5

Associated Gene:

Gene:

ORC5

Ensembl Gene ID:

ENSAPLG00000002905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024455

12770816 - 12839172

68357

ENSAPLT00000002989

12770816 - 12839172

68357