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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12818438_12820530_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12818438 - 12820530

Intron Length:

2093

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACTTTC

5'SS Class:

strong_major

3'SS Sequence:

ATCTGTCTTTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

ACTTCTTTATGT

Flanking Amino Acid:

MQTVYLREISSSQWERLQHD

Intron Amino Acid Position:

287

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

1.1

82.3

32.2

Major BPS

83.9

0.84

73.9

41.3

Major PPT

76.7

0.6

0.8

36.1

Minor 5ss

51.2

0.04

2.5

70.2

40.4

Minor BPS

56.2

0.27

1.9

73.56

43.9

Associated Gene:

Gene:

ORC5

Ensembl Gene ID:

ENSAPLG00000002905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024455

12770816 - 12839172

68357

ENSAPLT00000002989

12770816 - 12839172

68357