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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12820995_12825477_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12820995 - 12825477

Intron Length:

4483

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTGAGATGA

5'SS Class:

major

3'SS Sequence:

TTATTTTCTGTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

ACCTTCTTAATA

Flanking Amino Acid:

CRDLKELQHLAALNFSKYCE

Intron Amino Acid Position:

241

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

0.9

66.5

35.2

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

0.79

0.7

81.8

29.9

Minor 5ss

-2.1

35.5

43.1

Minor BPS

69.9

0.62

1.2

68.6

38.6

Associated Gene:

Gene:

ORC5

Ensembl Gene ID:

ENSAPLG00000002905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024455

12770816 - 12839172

68357

ENSAPLT00000002989

12770816 - 12839172

68357