Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_128299672_128303280_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

128299672 - 128303280

Intron Length:

3609

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGTACAT

5'SS Class:

major

3'SS Sequence:

TCTCTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ATCTTAC

U12 Branch Point Sequence:

TATATCTTACCG

Flanking Amino Acid:

NQNVVPPGKKLSALQAKVHY

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.49

1.1

64.4

41.5

Major BPS

72.7

0.56

0.9

63.4

35.2

Major PPT

89.6

0.89

0.6

88.3

21.5

Minor 5ss

32.3

-2

3.4

47.5

47.9

Minor BPS

58.8

0.14

1.7

64.91

42.8

Associated Gene:

Gene:

FRMPD4

Ensembl Gene ID:

ENSAPLG00000004467

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004579

128289989 - 128597283

307295