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Intron Name: Anas_platyrhynchos_platyrhynchos_1_12831217_12835876_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

12831217 - 12835876

Intron Length:

4660

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGTTTG

5'SS Class:

strong_major

3'SS Sequence:

CTGTTCTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

GTAAAAT

U12 Branch Point Sequence:

ATAGCAGTAAAA

Flanking Amino Acid:

VMQTLLNTLQLPHVFVNCVE

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

96.7

1.1

0.7

87.9

29.3

Major BPS

52.8

0.07

1.3

61.7

41.5

Major PPT

83.5

0.75

0.8

81.1

30.9

Minor 5ss

43.8

-0.7

2.8

57.8

46.8

Minor BPS

43.4

-0.5

2.3

57.26

41.5

Associated Gene:

Gene:

ORC5

Ensembl Gene ID:

ENSAPLG00000002905

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024455

12770816 - 12839172

68357

ENSAPLT00000002989

12770816 - 12839172

68357