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Intron Name: Anas_platyrhynchos_platyrhynchos_1_1284689_1286598_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

1284689 - 1286598

Intron Length:

1910

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGGACT

5'SS Class:

strong_major

3'SS Sequence:

GCCTCTGTTTCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AGCTGAT

U12 Branch Point Sequence:

TCCCTGCTCACT

Flanking Amino Acid:

IRKRQQTRLLRKLRATLDEY

Intron Amino Acid Position:

113

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.5

0.77

76.4

38.8

Major BPS

67.4

0.43

1.1

57.1

41.8

Major PPT

75.6

0.58

0.9

37.9

Minor 5ss

35.4

-1.7

3.2

45.2

Minor BPS

38.7

-0.8

2.5

56.84

45.9

Associated Gene:

Gene:

NRF1

Ensembl Gene ID:

ENSAPLG00000003164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000047126

1267098 - 1289780

22683

ENSAPLT00000042267

1268512 - 1289780

21269

ENSAPLT00000003275

1266696 - 1289780

23085