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Intron Name: Anas_platyrhynchos_platyrhynchos_1_128727420_128728409_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

128727420 - 128728409

Intron Length:

990

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTAAGTTTC

5'SS Class:

strong_major

3'SS Sequence:

TGTGCTTTCTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTAAA

U12 Branch Point Sequence:

AAATGTTTCATG

Flanking Amino Acid:

YAKLGFLASDGFLAEYHDEF

Intron Amino Acid Position:

505

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.1

0.9

82.3

32.2

Major BPS

77.8

0.69

78.2

31.8

Major PPT

0.56

0.8

73.3

37.1

Minor 5ss

44.3

-0.6

2.8

53.4

43.8

Minor BPS

43.6

-0.6

2.1

47.19

40.5

Associated Gene:

Gene:

MSL3

Ensembl Gene ID:

ENSAPLG00000009050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017597

128727320 - 128746889

19570