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Intron Name: Anas_platyrhynchos_platyrhynchos_1_128728455_128737200_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

128728455 - 128737200

Intron Length:

8746

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAATGCGA

5'SS Class:

major

3'SS Sequence:

AATTTGGACTTAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

GTTTTTTTAATT

Flanking Amino Acid:

ALVKHFEMFLRSRAGYAKLG

Intron Amino Acid Position:

490

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.64

1.1

62.5

43.6

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

58.5

0.19

55.6

Minor 5ss

30.2

-2.3

3.2

39.4

45.8

Minor BPS

0.99

87.87

31.1

Associated Gene:

Gene:

MSL3

Ensembl Gene ID:

ENSAPLG00000009050

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000017597

128727320 - 128746889

19570