Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_128775173_128777662_R

Intron Information:

Intron Rank:

135980

Intron Class:

major

Intron Phase:

Intron Coordinates:

128775173 - 128777662

Intron Length:

2490

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TGG|GTGAGTTTA

5'SS Class:

strong_major

3'SS Sequence:

TTGGCTTCAACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTCAT

U12 Branch Point Sequence:

TCTCCCTTAGTT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.3

0.81

0.9

80.2

30.7

Major BPS

94.9

1.12

0.6

93.9

14.7

Major PPT

0.47

66.2

39.6

Minor 5ss

37.9

-1.4

2.9

40.8

45.4

Minor BPS

68.1

0.65

1.6

81.41

40.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000020590

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000041383

128774850 - 128780906

6057