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Intron Name: Anas_platyrhynchos_platyrhynchos_1_128777577_128777662_R


Intron Information:

Intron Rank:
135982

Intron Class:
major

Intron Phase:

Intron Coordinates:
128777577 - 128777662

Intron Length:
86

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
TGG|GTGAGTTTA

5'SS Class:
strong_major

3'SS Sequence:
TTGGTGCCAACAG|C

3'SS Class:
major_PPT

U2 Branch Point Sequence:
TTCTTAT

U12 Branch Point Sequence:
GATTTGTTAAAT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
84.3
0.81
0.9
80.2
30.7

Major BPS
91.4
1.03
0.7
79.9
34.9

Major PPT
65.1
0.34
1
59
41.9

Minor 5ss
37.9
-1.4
2.9
40.8
45.4

Minor BPS
54.7
0.23
2.1
74.99
41.3

Associated Gene:

Gene:

Ensembl Gene ID:

Chromosome:
1

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

128777311 - 128780906
3596