Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_129078835_129081601_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129078835 - 129081601

Intron Length:

2767

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGAATA

5'SS Class:

strong_major

3'SS Sequence:

GCTCTACTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AAATCAT

U12 Branch Point Sequence:

TGTGCTCTACTT

Flanking Amino Acid:

DSCCQHLEKHGLQTVGIFRV

Intron Amino Acid Position:

402

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.2

0.85

0.9

82.6

29.6

Major BPS

71.6

0.54

33.1

Major PPT

76.9

0.61

0.9

69.7

35.6

Minor 5ss

37.2

-1.4

46.4

Minor BPS

47.4

-0.1

68.74

42.8

Associated Gene:

Gene:

ARHGAP6

Ensembl Gene ID:

ENSAPLG00000008489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008828

128787259 - 129105970

318712

ENSAPLT00000022265

128787259 - 129105970

318712