Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_1_129095309_129101533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

129095309 - 129101533

Intron Length:

6225

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATC|GTGAGTAAT

5'SS Class:

major

3'SS Sequence:

CAATATTTCCCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTCAT

U12 Branch Point Sequence:

TTTTCATTAACA

Flanking Amino Acid:

YLLRRKASQSSSPEMLRSEG

Intron Amino Acid Position:

613

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

75.8

35.2

Major BPS

100

1.24

0.5

100

Major PPT

70.7

0.47

61.5

43.7

Minor 5ss

33.5

-1.9

2.8

42.9

38.5

Minor BPS

84.1

1.07

1.4

93.02

25.5

Associated Gene:

Gene:

ARHGAP6

Ensembl Gene ID:

ENSAPLG00000008489

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000008828

128787259 - 129105970

318712

ENSAPLT00000022265

128787259 - 129105970

318712